BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021H12LP1|AL427839
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 410 e-114
>3x_Contig1807
Length = 66587
Score = 410 bits (177), Expect = e-114
Identities = 211/235 (89%)
Strand = Plus / Plus
Query: 563 ttastkattgttatgaattaaatkataastgasakasaassaacmaaggagaacactgta 622
||| | |||||| || ||||||| ||| ||| | || ||| |||||||||||||||
Sbjct: 8530 ttagttattgttctgcattaaattatacgtgagatcgaaggaaccaaggagaacactgta 8589
Query: 623 aataatgcamttaattastcsaccaccgatttaattatccattaatttcattatcaamta 682
||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| ||
Sbjct: 8590 aataatgcacttaattagtcgaccaccgatttaattatccattaatttcattatcaacta 8649
Query: 683 maactcasaatsacatmcaattacattaatactactaaccctctagacaaagttcctacc 742
|| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8650 caagtcagaatgacatccaattacattaatactactaaccctctagacaaagttcctacc 8709
Query: 743 accaaatcttcatatcttctctaaaactaaaaaaattatatsccaatcatcatat 797
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 8710 accaaatcttcatatcttctctaaaactaaaaaaattatatgccaatcatcatat 8764
Score = 248 bits (107), Expect = 1e-65
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 9 ggatctaactttttcccttcgaaacctgaagtatttttgtagtttctagagctaatttaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7976 ggatctaactttttcccttcgaaacctgaagtatttttgtagtttctagagctaatttaa 8035
Query: 69 ttgataactccaagggtatgacacttaggcaagattaamtaggctaaaa 117
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 8036 ttgataactccaagggtatgacacttaggcaagattaactaggctaaaa 8084
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.61 0.746 1.50
Gapped
Lambda K H
1.61 0.746 1.50
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2239
Number of Sequences: 1807
Number of extensions: 2239
Number of successful extensions: 225
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 14
effective length of query: 783
effective length of database: 10,333,253
effective search space: 8090937099
effective search space used: 8090937099
T: 0
A: 40
X1: 5 (11.6 bits)
X2: 12 (27.8 bits)
S1: 10 (23.6 bits)
S2: 43 (100.2 bits)